Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015812178.1_cds_XP_016497030.1_11195
CDS Infomation

[gene=LOC107815896] [db_xref=GeneID:107815896] [protein=TMV resistance protein N-like] [protein_id=XP_016497030.1] [location=join(78344..78843,79178..80162,81075..81350,81443..82285,86735..87291,88362..88491)] [gbkey=CDS]
Sequence

ATGGATACTCAATTAGTTAGAGGAGAATCATCTACATCTTCTCACTTCTCTTATGAAGTA
TTCCTGAGTTTTAGAGGTGAAGACACCCGAAAAACATTCACTGGTCATCTTTATTCCAAA
TTGTGTGATGTTGGAATTAATACCTTCATTGATGATGAGGAATTGAGAAAGGGTGATGTG
ATTTCAAGAGAACTAGAGAAATCAATTGAAGAGTCAAGAATTTCCATTATTGTTTTCTCA
AGAAATTATGCTTCCTCTAGTTGGTGTCTAGATGAACTAGTTAAAATTCTCGAATGCAAA
GAGAAATTAAAGCAGATGGTTTTGCCTATTTTCTATGATGTTGATCCTTCTGAAGTGCGA
AGACAAACTGGGTTATTTGGGGAAGCTTTGGCAAAACATAAGGAACGATCAATTGGGGCT
CAAAGGGTGGAGAAATGGAGAGCTGCACTTACTGAAGCTGCAAATTTATCTGGATGGGAT
TTGCAAAATGTTGCTGACGGGCATGAATCAAAGTTTATTGAAAACATTATACAACAAGTC
CTACAAGAGGTCAACCAGACGCCTCTAGATGTTGCTTGGCATCCAGTTGGTGAAGATTAT
CGTGTCAAAGATATAGAGTTGTTATTGCAAAATGAATGTGAAGATGGAGTTCGCATGATT
GGTATTCACGGAGTTGGTGGCATAGGGAAAACAACTCTGGCAAAAGCTATCTACAATCAA
ATGTTTCGACTCTTCGATAGTAGTTGCTTCCTTTCGGATGTTAGATCAGAAGCTGAAGAA
TTTGGTCTTGTCAAGCTACAAGAGAAACTTCTTCAACAATTACTCAAAAATAAGGACATC
AAAGTTGGCAGTATTGCTCAAGGCATCAATCTAATCAAAGCAAGACTCGAGTCAAAGAAG
GTTCTAATTGTTCTTGATGACGTGGACCACAAAAACCATTTAGAATCCTTAACAAGAGAA
AGAAGTTGGTTTGGTTCGGGTAGTTTAATAATCATTACCACCCGGGACAAGCGATTGCTA
TGTCGGCTTGGAGAAAAAGAGAGATATGAGGCTGAACTATTAAATGCCAATGAAGCTATG
TTACTTTTTTGTTGGCATGCTTTTGACAGTCATTTTCCACCAGAAGATTATGTTAATTTG
GCACGAGACATAATCAAATATTCAGGCAGGCTACCATTAGCTCTTGTGATATTGGGGTCA
CACTTACAAGGAAGTTCTGTAGAAGAATGGGGATATGAATTCGAAAAACTAAGAGCAATT
CCTCATTGTGATATCCAAAAGATTCTCAAGATAAGCTTTGATGGACTTGATGATGGAACA
CAGACTGTTTTCCTCGATATTGCATGCGCCTTCCATGGGTTTGATGAGCATGAAGTTACT
GAAATATTAAATGCATGTGGCTTTCATGCTAAAAGTGCAATTGCTACTTTAGTCCAAAAA
CACTTGCTCCAAAAATCTTGGAATATTTTGGAGATGCATGATCTAGGTTCCAAAAAGGTA
GAAGTACTGAAGGTAGATCGACGAGCATTTGAGGGAGTGAACTTGAGCACCAAAGCATTT
AAGAAAATGAAAAACCTTAGGGTTCTTATAATGGATGAGTTACATATTAGTGGAGATTTT
GAGCTGTTGTCCAAGGTGCTCAGATGGTTGTCTTGGAAAAAATGTCCTTTAAAATGTATA
CCATCAAATTTTCCAGCTGAGAATCTTGTAGCTCTAGATATGCAGGAGAGTGATATCCAA
GAATTTCAATTGAATTTGCAGTGTTGTAGAAGTTTGAAGAAGTTGGATCTCTCTTATTGC
AAGCAACTCAGAAGGACTCCAAACTTCAACGGTTCACGAAGTCTTGAGACTTTGCTGCTT
GGTGGTTGCTCAAGTCTGACAGAGATCCATCCATCAATAGGAAATTTGGACAGACTAATT
AAACTAGATATGTCTAGTAGCGAAAAAATTACGTATCTTCCAAGCAGCATATGCCAGCTA
AAATCCCTTGAAGACTTGGACGTTGATGGCTGCTCATCTATAAAAACACTGCCAGATAAC
CTTGGAGATATGAAAAGTCTATTATGTCTTTCTGCATCTGGTACGGGTATAAAACAATTG
CCTAGATCTGTTGAAATGCTAAGAAATCTTTTAACTTTGAGAGTGGGAGGTCGAAAGAGA
GAGGCCAAAAGGAGTATTTCTGGAAGTGGAGTCCATCGGATACAATATTCCTTGTCAACT
TTTGTATCCGAATTGAGCCTTACATACTGTAATTTGTCCGAGGCTGATATTCCTAGGGAT
ATTGGGAGCTTATCCTCCTTAGAATATTTAGATTTGAGTGGCAACAGTTTCCATTGTCTA
CCCATTGATTTTTCTAAGTTAGGATTATTGGCGGAGTTGTGTTTGAATGACTGTGAGAAT
CTTCAAACACTCCCGTCAGTATCAAATTTAGAGAATCTTGCAATTATTGAACTTGAAAAT
TGCCAAAAATTGGTCAAGATTACAGAGTTGGACAACCTCCCTTCTATAAAGCGGATCTAC
ATGATAAATTGTAGTTCTCTGCAGAATCCATTCAATGAAGGCTTCTTTAGTGCACCTGCT
GCATTTAGAAAAGATCCAGATATGCTCTGCTTAGCTACTTTCCCTTTACTGAAAAATCAA
CCCTTAATTCTTGCATTCTCATCAAATCAAATGGATACTCAATTAGTTAGAGGAGAATCA
TCTCACTTCTCTTATGAAGTATTCCTGAGTTTTAGAGGTGAAGACACCCGAAAAACATTC
ACTGGTCATCTTTATTCCAAATTGTCTGATGTTGGAATTAATACCTTCATTGACGACGAG
GAATTGAGAAAGGGTGACGTGATTTCAAGAGAATTAGAGAAAGCAATTGAAGAGTCAAGA
ATTTCCATTATTGTTTTCTCAAGAAATTATGCTTCCTCTAGTTGGTGTCTAAATGAACTA
GTTAAAATTCTCGAATGCAAAGAGAAATTAAAGCAGATGGTTTTGTCTATTTTCTATGAT
GTTGATCCTTCTCAAGTGCGAAGACAAACTGGGTTATTTGGGGAAGCTTTGGCAAAACAT
AAGGAACGATCAATTGGGACTCAAAGGGTGGAGAAATGGAGAGCTGCACTTACTGAAGCT
GCAAATTTATCTGGATGGGATTTGCAAAATGTTGCTGACGGGCATGAATCAAAGTTTATT
GAAAAAATTATACAACAAGTCCTACAAGAGGTCAACCAGACGCCTCTAGATGTTGCTTCC
AGTTGGTGTAGATTATCGTGTCAAAGATATAGATTTGTTATTGCAAAATGA

Peptide Sequence

PEP ID

XP_016497030.1
PEP Infomation

PREDICTED: TMV resistance protein N-like [Nicotiana tabacum]
Sequence

MDTQLVRGESSTSSHFSYEVFLSFRGEDTRKTFTGHLYSKLCDVGINTFIDDEELRKGDV
ISRELEKSIEESRISIIVFSRNYASSSWCLDELVKILECKEKLKQMVLPIFYDVDPSEVR
RQTGLFGEALAKHKERSIGAQRVEKWRAALTEAANLSGWDLQNVADGHESKFIENIIQQV
LQEVNQTPLDVAWHPVGEDYRVKDIELLLQNECEDGVRMIGIHGVGGIGKTTLAKAIYNQ
MFRLFDSSCFLSDVRSEAEEFGLVKLQEKLLQQLLKNKDIKVGSIAQGINLIKARLESKK
VLIVLDDVDHKNHLESLTRERSWFGSGSLIIITTRDKRLLCRLGEKERYEAELLNANEAM
LLFCWHAFDSHFPPEDYVNLARDIIKYSGRLPLALVILGSHLQGSSVEEWGYEFEKLRAI
PHCDIQKILKISFDGLDDGTQTVFLDIACAFHGFDEHEVTEILNACGFHAKSAIATLVQK
HLLQKSWNILEMHDLGSKKVEVLKVDRRAFEGVNLSTKAFKKMKNLRVLIMDELHISGDF
ELLSKVLRWLSWKKCPLKCIPSNFPAENLVALDMQESDIQEFQLNLQCCRSLKKLDLSYC
KQLRRTPNFNGSRSLETLLLGGCSSLTEIHPSIGNLDRLIKLDMSSSEKITYLPSSICQL
KSLEDLDVDGCSSIKTLPDNLGDMKSLLCLSASGTGIKQLPRSVEMLRNLLTLRVGGRKR
EAKRSISGSGVHRIQYSLSTFVSELSLTYCNLSEADIPRDIGSLSSLEYLDLSGNSFHCL
PIDFSKLGLLAELCLNDCENLQTLPSVSNLENLAIIELENCQKLVKITELDNLPSIKRIY
MINCSSLQNPFNEGFFSAPAAFRKDPDMLCLATFPLLKNQPLILAFSSNQMDTQLVRGES
SHFSYEVFLSFRGEDTRKTFTGHLYSKLSDVGINTFIDDEELRKGDVISRELEKAIEESR
ISIIVFSRNYASSSWCLNELVKILECKEKLKQMVLSIFYDVDPSQVRRQTGLFGEALAKH
KERSIGTQRVEKWRAALTEAANLSGWDLQNVADGHESKFIEKIIQQVLQEVNQTPLDVAS
SWCRLSCQRYRFVIAK

Transcript Sequence

Gene sequence data has not been registered.